Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_19095 | Not Available | Positive | 4476807 - 4478096 | 48123.5 |
| deoxyribonuclease iv | DWX04_19100 | Not Available | Positive | 4478139 - 4478975 | 31424.5 |
| marr family transcriptional regulator | DWX04_19105 | Not Available | Negative | 4479450 - 4481522 | 78482.4 |
| trpb-like pyridoxal phosphate-dependent enzyme | DWX04_19110 | Not Available | Negative | 4482140 - 4483504 | 50196.2 |
| potassium transporter | DWX04_19115 | Not Available | Positive | 4483681 - 4485528 | 68659.9 |
| trka family potassium uptake protein | DWX04_19120 | Not Available | Positive | 4485531 - 4486217 | 25637.0 |
| duf4738 domain-containing protein | DWX04_19125 | Not Available | Positive | 4486432 - 4487001 | 21153.6 |
| hypothetical protein | DWX04_19130 | Not Available | Positive | 4487094 - 4487534 | 16654.3 |
| l-serine ammonia-lyase | DWX04_19135 | Not Available | Negative | 4487713 - 4488921 | 43967.2 |
| metallophosphatase | DWX04_19140 | Not Available | Negative | 4489071 - 4490234 | 44528.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

