Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | DWX04_01530 | Not Available | Negative | 349910 - 350131 | 8364.46 |
| ribonuclease p protein component | DWX04_01535 | Not Available | Negative | 350128 - 350520 | 15158.8 |
| uroporphyrinogen-iii synthase | DWX04_01540 | Not Available | Negative | 350623 - 351372 | 28649.6 |
| duf4271 domain-containing protein | DWX04_01545 | Not Available | Negative | 351377 - 352189 | 31597.2 |
| tigr00730 family rossman fold protein | DWX04_01550 | Not Available | Negative | 352186 - 352773 | 21517.4 |
| methionine adenosyltransferase | DWX04_01555 | Not Available | Negative | 352888 - 354180 | 47598.8 |
| mfs transporter | DWX04_01560 | Not Available | Positive | 354458 - 355834 | 49058.6 |
| metallophosphoesterase | DWX04_01565 | Not Available | Positive | 355888 - 356718 | 31399.9 |
| acyltransferase | DWX04_01570 | Not Available | Positive | 356733 - 357875 | 43811.9 |
| hypothetical protein | DWX04_01575 | Not Available | Positive | 358234 - 360111 | 72369.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

