Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate synthase component i | DWX04_18940 | Not Available | Negative | 4436916 - 4437899 | 37492.0 |
| ahpc/tsa family protein | DWX04_18945 | Not Available | Negative | 4438505 - 4439683 | 44862.0 |
| tlpa family protein disulfide reductase | DWX04_18950 | Not Available | Negative | 4439691 - 4441067 | 51112.2 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_18955 | Not Available | Negative | 4441079 - 4442470 | 53197.5 |
| susc/raga family tonb-linked outer membrane protein | DWX04_18960 | Not Available | Negative | 4442489 - 4445983 | 130488.0 |
| fecr family protein | DWX04_18965 | Not Available | Negative | 4446041 - 4447120 | 41259.7 |
| sigma-70 family rna polymerase sigma factor | DWX04_18970 | Not Available | Negative | 4447193 - 4447759 | 22575.3 |
| Trna-his | Not Available | Not Available | Positive | 4447834 - 4447910 | Not Available |
| capa family protein | DWX04_18980 | Not Available | Negative | 4447986 - 4449059 | 40883.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DWX04_18985 | Not Available | Negative | 4449998 - 4450879 | 31535.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

