Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | DWX04_18690 | Not Available | Negative | 4378232 - 4380346 | 81070.3 |
| glycoside hydrolase | DWX04_18695 | Not Available | Negative | 4380325 - 4382679 | 89145.7 |
| beta-glucuronidase | DWX04_18700 | Not Available | Positive | 4382891 - 4385758 | 110043.0 |
| rhamnogalacturonan acetylesterase | DWX04_18705 | Not Available | Positive | 4385777 - 4387051 | 47778.3 |
| glycoside hydrolase family 28 protein | DWX04_18710 | Not Available | Positive | 4387069 - 4388553 | 54905.2 |
| duf4450 domain-containing protein | DWX04_18715 | Not Available | Positive | 4388531 - 4389229 | 26005.4 |
| hypothetical protein | DWX04_18720 | Not Available | Positive | 4389226 - 4390029 | 30936.2 |
| glycoside hydrolase family 28 protein | DWX04_18725 | Not Available | Positive | 4390045 - 4391469 | 52159.9 |
| glycosyl hydrolase family 2 | DWX04_18730 | Not Available | Positive | 4391486 - 4394248 | 104010.0 |
| hypothetical protein | DWX04_18735 | Not Available | Negative | 4394601 - 4394723 | 4281.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

