Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DWX04_18590 | Not Available | Positive | 4350251 - 4350748 | 19290.4 |
| dna alkylation repair protein | DWX04_18595 | Not Available | Positive | 4350769 - 4351485 | 28304.2 |
| n-glycanase | DWX04_18600 | Not Available | Negative | 4351590 - 4352840 | 46710.9 |
| duf4301 family protein | DWX04_18605 | Not Available | Negative | 4352960 - 4354477 | 56771.2 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DWX04_18610 | Not Available | Positive | 4354621 - 4356834 | 84481.2 |
| diacylglycerol kinase family protein | DWX04_18615 | Not Available | Positive | 4356856 - 4357209 | 13045.2 |
| duf1573 domain-containing protein | DWX04_18620 | Not Available | Positive | 4357304 - 4357717 | 14871.0 |
| metallophosphoesterase | DWX04_18625 | Not Available | Positive | 4357926 - 4358732 | 31254.2 |
| hypothetical protein | DWX04_18630 | Not Available | Positive | 4358698 - 4359459 | 30020.0 |
| oligopeptide transporter, opt family | DWX04_18635 | Not Available | Positive | 4359545 - 4361536 | 70057.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

