Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_01480 | Not Available | Negative | 340804 - 341082 | 10591.7 |
| hypothetical protein | DWX04_01485 | Not Available | Negative | 341079 - 341273 | 7289.79 |
| hypothetical protein | DWX04_01490 | Not Available | Negative | 341291 - 341545 | 10006.8 |
| duf4373 domain-containing protein | DWX04_01495 | Not Available | Negative | 341567 - 342607 | 39724.0 |
| dna-binding protein | DWX04_01500 | Not Available | Negative | 342612 - 342875 | 9993.02 |
| site-specific integrase | DWX04_01505 | Not Available | Negative | 342887 - 344137 | 48872.3 |
| Trna-gln | Not Available | Not Available | Positive | 344310 - 344380 | Not Available |
| peptidase s41 | DWX04_01515 | Not Available | Positive | 344515 - 347769 | 121946.0 |
| tyrosine--trna ligase | DWX04_01520 | Not Available | Negative | 347894 - 349186 | 48043.5 |
| hydrolase tatd | DWX04_01525 | Not Available | Negative | 349266 - 349895 | 24024.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

