Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter | DWX04_18480 | Not Available | Negative | 4326822 - 4328120 | 45850.3 |
| nitronate monooxygenase | DWX04_18485 | Not Available | Positive | 4328362 - 4329312 | 34187.3 |
| sodium:solute symporter | DWX04_18490 | Not Available | Negative | 4329521 - 4330954 | 52090.3 |
| dihydrodipicolinate synthase family protein | DWX04_18495 | Not Available | Negative | 4330968 - 4331900 | 34028.5 |
| atp-binding cassette domain-containing protein | DWX04_18500 | Not Available | Negative | 4332063 - 4333511 | 55056.9 |
| hypothetical protein | DWX04_18510 | Not Available | Positive | 4334236 - 4334961 | 25779.0 |
| atp-dependent dethiobiotin synthetase biod | DWX04_18520 | Not Available | Negative | 4335405 - 4336049 | 24302.0 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DWX04_18525 | Not Available | Negative | 4336064 - 4336819 | 28825.8 |
| duf452 family protein | DWX04_18530 | Not Available | Negative | 4336831 - 4337484 | 25132.3 |
| 8-amino-7-oxononanoate synthase | DWX04_18535 | Not Available | Negative | 4337481 - 4338632 | 43008.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

