Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DWX04_18430 | Not Available | Negative | 4314275 - 4315618 | 50274.4 |
| duf4492 domain-containing protein | DWX04_18435 | Not Available | Positive | 4315772 - 4315990 | 8685.8 |
| cytochrome ubiquinol oxidase subunit i | DWX04_18440 | Not Available | Positive | 4316014 - 4317516 | 55113.9 |
| cytochrome d ubiquinol oxidase subunit ii | DWX04_18445 | Not Available | Positive | 4317671 - 4318816 | 42798.5 |
| 6-phosphogluconolactonase | DWX04_18450 | Not Available | Negative | 4319112 - 4319816 | 26417.3 |
| glucose-6-phosphate dehydrogenase | DWX04_18455 | Not Available | Negative | 4319878 - 4321386 | 58280.9 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | DWX04_18460 | Not Available | Negative | 4321435 - 4322871 | 53142.1 |
| dicarboxylate/amino acid:cation symporter | DWX04_18465 | Not Available | Positive | 4322956 - 4324134 | 42069.5 |
| hypothetical protein | DWX04_18470 | Not Available | Negative | 4324339 - 4325508 | 45056.2 |
| l-asparaginase 2 | DWX04_18475 | Not Available | Negative | 4325596 - 4326654 | 37843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

