Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m15 | DWX04_18375 | Not Available | Positive | 4304999 - 4305325 | 12385.6 |
| hypothetical protein | DWX04_18380 | Not Available | Positive | 4305329 - 4305865 | 19668.6 |
| hypothetical protein | DWX04_18385 | Not Available | Positive | 4305960 - 4306205 | 9398.36 |
| hypothetical protein | DWX04_18390 | Not Available | Negative | 4306239 - 4306463 | 8812.7 |
| duf5053 domain-containing protein | DWX04_18395 | Not Available | Negative | 4306739 - 4307161 | 16118.4 |
| recombinase | DWX04_18400 | Not Available | Negative | 4307473 - 4308654 | 45903.5 |
| dna-binding response regulator | DWX04_18405 | Not Available | Negative | 4309033 - 4309758 | 27866.9 |
| abc transporter permease | DWX04_18415 | Not Available | Negative | 4311003 - 4312223 | 44156.1 |
| abc transporter atp-binding protein | DWX04_18420 | Not Available | Negative | 4312242 - 4312985 | 27195.8 |
| efflux rnd transporter periplasmic adaptor subunit | DWX04_18425 | Not Available | Negative | 4313027 - 4314250 | 44016.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

