Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na(+)-translocating nadh-quinone reductase subunit c | DWX04_18160 | Not Available | Negative | 4230036 - 4230710 | 24676.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DWX04_18165 | Not Available | Negative | 4230724 - 4231932 | 43554.0 |
| na(+)-translocating nadh-quinone reductase subunit a | DWX04_18170 | Not Available | Negative | 4231961 - 4233310 | 49524.8 |
| hypothetical protein | DWX04_18175 | Not Available | Negative | 4233555 - 4234355 | 30612.2 |
| hypothetical protein | DWX04_18180 | Not Available | Positive | 4234495 - 4234836 | 13108.6 |
| hypothetical protein | DWX04_18185 | Not Available | Positive | 4234885 - 4235088 | 7631.28 |
| hypothetical protein | DWX04_18190 | Not Available | Negative | 4235098 - 4236123 | 40393.9 |
| glycosyl hydrolase family 43 | DWX04_18200 | Not Available | Negative | 4238289 - 4239611 | 49770.6 |
| arylsulfatase | DWX04_18205 | Not Available | Negative | 4240011 - 4241426 | 53041.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_18210 | Not Available | Negative | 4241444 - 4243069 | 61301.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

