Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| port family protein | DWX04_01430 | Not Available | Negative | 329794 - 330381 | 21981.3 |
| hypothetical protein | DWX04_01435 | Not Available | Positive | 330434 - 330625 | 6917.68 |
| glycoside hydrolase | DWX04_01440 | Not Available | Negative | 330588 - 332567 | 75349.0 |
| dna mismatch repair protein muts | DWX04_01445 | Not Available | Negative | 332617 - 335229 | 97841.4 |
| flavin reductase family protein | DWX04_01450 | Not Available | Positive | 335348 - 335854 | 19394.2 |
| hypothetical protein | DWX04_01455 | Not Available | Negative | 336467 - 336934 | 16814.2 |
| hypothetical protein | DWX04_01460 | Not Available | Negative | 336959 - 337357 | 14210.9 |
| n-acetylmuramoyl-l-alanine amidase | DWX04_01465 | Not Available | Negative | 337878 - 338354 | 17326.8 |
| duf4248 domain-containing protein | DWX04_01470 | Not Available | Negative | 338407 - 338652 | 9147.02 |
| hypothetical protein | DWX04_01475 | Not Available | Negative | 340211 - 340705 | 18673.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

