Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit b | DWX04_18010 | Not Available | Positive | 4196285 - 4198318 | 72462.0 |
| k(+)-transporting atpase subunit c | DWX04_18015 | Not Available | Positive | 4198332 - 4198901 | 20611.8 |
| hypothetical protein | DWX04_18020 | Not Available | Positive | 4199175 - 4199876 | 25488.1 |
| hypothetical protein | DWX04_18025 | Not Available | Positive | 4199893 - 4200138 | 9357.46 |
| had family hydrolase | DWX04_18030 | Not Available | Negative | 4200135 - 4200824 | 26385.9 |
| chloramphenicol acetyltransferase | DWX04_18035 | Not Available | Negative | 4200862 - 4201497 | 24088.7 |
| aspartate kinase | DWX04_18040 | Not Available | Negative | 4201907 - 4203253 | 50746.8 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | DWX04_18045 | Not Available | Positive | 4203614 - 4205866 | 86515.2 |
| glycoside hydrolase family 15 protein | DWX04_18050 | Not Available | Positive | 4205885 - 4207672 | 69848.9 |
| class a beta-lactamase, subclass a2 | DWX04_18055 | Not Available | Positive | 4207731 - 4208690 | 36110.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

