Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar o-acetyltransferase | DWX04_17960 | Not Available | Negative | 4187006 - 4187557 | 20072.3 |
| dmt family transporter | DWX04_17965 | Not Available | Negative | 4187570 - 4188478 | 34073.1 |
| glycine/betaine abc transporter substrate-binding protein | DWX04_17970 | Not Available | Negative | 4188623 - 4189465 | 31693.3 |
| proline/glycine betaine abc transporter permease | DWX04_17975 | Not Available | Negative | 4189468 - 4190292 | 29538.8 |
| glycine betaine/l-proline abc transporter atp-binding protein | DWX04_17980 | Not Available | Negative | 4190289 - 4191515 | 45636.3 |
| sigma-54-dependent fis family transcriptional regulator | DWX04_17985 | Not Available | Positive | 4191816 - 4193153 | 50007.5 |
| hypothetical protein | DWX04_17990 | Not Available | Negative | 4193193 - 4193315 | 4390.24 |
| o-acetyl-adp-ribose deacetylase | DWX04_17995 | Not Available | Negative | 4193544 - 4194170 | 22651.2 |
| potassium-transporting atpase subunit f | DWX04_18000 | Not Available | Positive | 4194438 - 4194518 | 3136.13 |
| k+-transporting atpase subunit a | DWX04_18005 | Not Available | Positive | 4194545 - 4196251 | 61976.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

