Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | DWX04_17910 | Not Available | Negative | 4180552 - 4180824 | 10202.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DWX04_17915 | Not Available | Negative | 4180898 - 4182196 | 50104.2 |
| signal recognition particle-docking protein ftsy | DWX04_17920 | Not Available | Negative | 4182200 - 4183159 | 34716.9 |
| duf4295 domain-containing protein | DWX04_17925 | Not Available | Negative | 4183333 - 4183488 | 5827.19 |
| 50s ribosomal protein l33 | DWX04_17930 | Not Available | Negative | 4183498 - 4183686 | 7205.97 |
| 50s ribosomal protein l28 | DWX04_17935 | Not Available | Negative | 4183707 - 4183967 | 9789.04 |
| cina family protein | DWX04_17940 | Not Available | Negative | 4184072 - 4184572 | 17534.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DWX04_17945 | Not Available | Negative | 4184594 - 4185613 | 36941.3 |
| type i methionyl aminopeptidase | DWX04_17950 | Not Available | Negative | 4185637 - 4186491 | 31857.2 |
| hypothetical protein | DWX04_17955 | Not Available | Positive | 4186728 - 4186946 | 8234.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

