Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DWX04_17745 | Not Available | Negative | 4131827 - 4134982 | 114902.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX04_17750 | Not Available | Negative | 4135448 - 4137334 | 72167.2 |
| susc/raga family tonb-linked outer membrane protein | DWX04_17755 | Not Available | Negative | 4137362 - 4140772 | 124898.0 |
| glpgli family protein | DWX04_17765 | Not Available | Negative | 4141373 - 4143079 | 63473.1 |
| dna-binding protein | DWX04_17770 | Not Available | Negative | 4143158 - 4143796 | 24089.6 |
| hypothetical protein | DWX04_17775 | Not Available | Positive | 4143798 - 4144004 | 7958.76 |
| virulence-associated protein e | DWX04_17780 | Not Available | Positive | 4144110 - 4145261 | 45299.6 |
| susc/raga family tonb-linked outer membrane protein | DWX04_17785 | Not Available | Positive | 4145598 - 4149023 | 124860.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX04_17790 | Not Available | Positive | 4149056 - 4150966 | 72454.8 |
| alpha-l-fucosidase | DWX04_17795 | Not Available | Positive | 4151064 - 4152467 | 54757.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

