Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | DWX04_17695 | Not Available | Positive | 4119435 - 4120337 | 33041.7 |
| sodium:solute symporter | DWX04_17700 | Not Available | Positive | 4120355 - 4122238 | 70908.7 |
| hypothetical protein | DWX04_17705 | Not Available | Negative | 4122630 - 4122926 | 11143.8 |
| aldo/keto reductase | DWX04_17710 | Not Available | Positive | 4123163 - 4124545 | 52411.6 |
| 4fe-4s dicluster domain-containing protein | DWX04_17715 | Not Available | Positive | 4124581 - 4126107 | 55278.2 |
| duf1893 domain-containing protein | DWX04_17720 | Not Available | Positive | 4126125 - 4126544 | 15747.2 |
| cupin domain-containing protein | DWX04_17725 | Not Available | Positive | 4126722 - 4127276 | 20522.8 |
| acetyl-coa synthetase | DWX04_17730 | Not Available | Positive | 4127360 - 4129012 | 62298.4 |
| hypothetical protein | DWX04_17735 | Not Available | Positive | 4129057 - 4129521 | 17243.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX04_17740 | Not Available | Negative | 4129835 - 4131805 | 74053.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

