Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | DWX04_17645 | Not Available | Positive | 4104478 - 4105446 | 36000.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DWX04_17650 | Not Available | Positive | 4105460 - 4106584 | 41008.9 |
| pyrroline-5-carboxylate reductase | DWX04_17655 | Not Available | Positive | 4106768 - 4107541 | 27247.4 |
| arac family transcriptional regulator | DWX04_17660 | Not Available | Positive | 4107724 - 4108614 | 34355.3 |
| hypothetical protein | DWX04_17665 | Not Available | Negative | 4108607 - 4108837 | 9089.74 |
| glycoside hydrolase | DWX04_17670 | Not Available | Positive | 4108947 - 4110461 | 55548.3 |
| tonb-dependent receptor | DWX04_17675 | Not Available | Positive | 4111291 - 4114320 | 110540.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_17680 | Not Available | Positive | 4114347 - 4116113 | 67708.4 |
| aryl-sulfate sulfotransferase | DWX04_17685 | Not Available | Positive | 4116186 - 4117985 | 68341.2 |
| glycosidase | DWX04_17690 | Not Available | Positive | 4118099 - 4119277 | 44095.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

