Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | DWX04_17595 | Not Available | Negative | 4094256 - 4095254 | 37375.8 |
| arac family transcriptional regulator | DWX04_17600 | Not Available | Negative | 4095262 - 4096182 | 35143.8 |
| duf4251 domain-containing protein | DWX04_17605 | Not Available | Negative | 4096313 - 4096810 | 18510.1 |
| rhamnulose-1-phosphate aldolase | DWX04_17610 | Not Available | Negative | 4097019 - 4097828 | 30253.7 |
| l-rhamnose/proton symporter rhat | DWX04_17615 | Not Available | Negative | 4097914 - 4098933 | 36101.1 |
| l-rhamnose isomerase | DWX04_17620 | Not Available | Negative | 4099026 - 4100282 | 47536.4 |
| rhamnulokinase | DWX04_17625 | Not Available | Negative | 4100322 - 4101800 | 55006.8 |
| arginine repressor | DWX04_17630 | Not Available | Positive | 4102107 - 4102583 | 17529.3 |
| n-acetyltransferase | DWX04_17635 | Not Available | Positive | 4102606 - 4103163 | 20661.0 |
| argininosuccinate synthase | DWX04_17640 | Not Available | Positive | 4103264 - 4104472 | 45142.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

