Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_17545 | Not Available | Positive | 4084256 - 4084915 | 24397.2 |
| m23 family peptidase | DWX04_17550 | Not Available | Positive | 4084925 - 4085548 | 22827.6 |
| hypothetical protein | DWX04_17555 | Not Available | Positive | 4085552 - 4085743 | 6973.57 |
| porin family protein | DWX04_17560 | Not Available | Positive | 4085948 - 4086484 | 19622.1 |
| port family protein | DWX04_17565 | Not Available | Positive | 4086688 - 4087293 | 21310.4 |
| port family protein | DWX04_17570 | Not Available | Positive | 4087439 - 4088110 | 24189.6 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | DWX04_17575 | Not Available | Negative | 4088208 - 4089383 | 43918.3 |
| hypothetical protein | DWX04_17580 | Not Available | Negative | 4089454 - 4089857 | 15048.7 |
| duf4981 domain-containing protein | DWX04_17585 | Not Available | Negative | 4090162 - 4093257 | 117523.0 |
| ion transporter | DWX04_17590 | Not Available | Positive | 4093373 - 4094230 | 32709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

