Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_01380 | Not Available | Negative | 321308 - 321553 | 9250.33 |
| tetratricopeptide repeat protein | DWX04_01385 | Not Available | Negative | 321670 - 322854 | 45989.3 |
| hypothetical protein | DWX04_01390 | Not Available | Negative | 322894 - 323157 | 10021.1 |
| is1595-like element isbvu2 family transposase | DWX04_01395 | Not Available | Positive | 323376 - 324299 | 36225.1 |
| hypothetical protein | DWX04_01400 | Not Available | Positive | 324762 - 325490 | 27178.7 |
| hypothetical protein | DWX04_01405 | Not Available | Positive | 325495 - 326088 | 22184.5 |
| hypothetical protein | DWX04_01410 | Not Available | Positive | 326090 - 326533 | 16811.2 |
| hypothetical protein | DWX04_01415 | Not Available | Positive | 326961 - 327503 | 20282.6 |
| hypothetical protein | DWX04_01420 | Not Available | Positive | 327500 - 327724 | 8263.6 |
| hypothetical protein | DWX04_01425 | Not Available | Negative | 328084 - 329751 | 64165.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

