Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_17440 | Not Available | Positive | 4063652 - 4063945 | 11206.1 |
| virulence protein e | DWX04_17445 | Not Available | Negative | 4064283 - 4065311 | 40242.1 |
| hypothetical protein | DWX04_17455 | Not Available | Negative | 4065728 - 4067428 | 66177.3 |
| hypothetical protein | DWX04_17460 | Not Available | Negative | 4067425 - 4067634 | 8322.64 |
| hypothetical protein | DWX04_17465 | Not Available | Positive | 4068012 - 4068362 | 13151.9 |
| hypothetical protein | DWX04_17470 | Not Available | Positive | 4068359 - 4068793 | 16751.3 |
| hypothetical protein | DWX04_17475 | Not Available | Positive | 4068798 - 4069514 | 26871.1 |
| arac family transcriptional regulator | DWX04_17480 | Not Available | Positive | 4070314 - 4070784 | 18466.7 |
| hypothetical protein | DWX04_17485 | Not Available | Positive | 4070895 - 4073996 | 112119.0 |
| lamg domain-containing protein | DWX04_17490 | Not Available | Positive | 4074228 - 4075022 | 29663.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

