Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWX04_17385 | Not Available | Negative | 4048289 - 4049122 | 32261.8 |
| efflux rnd transporter periplasmic adaptor subunit | DWX04_17390 | Not Available | Positive | 4049270 - 4050385 | 40051.3 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWX04_17395 | Not Available | Positive | 4050394 - 4053609 | 117313.0 |
| tolc family protein | DWX04_17400 | Not Available | Positive | 4053606 - 4054979 | 50209.7 |
| duf4934 domain-containing protein | DWX04_17405 | Not Available | Negative | 4055060 - 4056292 | 46096.8 |
| duf3332 domain-containing protein | DWX04_17410 | Not Available | Negative | 4056373 - 4056924 | 19899.6 |
| mfs transporter | DWX04_17415 | Not Available | Positive | 4057098 - 4058486 | 51163.3 |
| duf4831 family protein | DWX04_17420 | Not Available | Negative | 4058568 - 4059617 | 38630.6 |
| nad(p)h-hydrate dehydratase | DWX04_17425 | Not Available | Negative | 4059654 - 4061189 | 56177.5 |
| hypothetical protein | DWX04_17435 | Not Available | Positive | 4062846 - 4063640 | 30067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

