Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | DWX04_17235 | Not Available | Negative | 4015119 - 4015691 | 22162.7 |
| hypothetical protein | DWX04_17240 | Not Available | Negative | 4015673 - 4015855 | 6793.87 |
| guanylate kinase | DWX04_17245 | Not Available | Negative | 4015860 - 4016429 | 21367.4 |
| yicc family protein | DWX04_17250 | Not Available | Negative | 4016476 - 4017351 | 33867.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DWX04_17255 | Not Available | Positive | 4017447 - 4018136 | 25285.7 |
| duf4290 domain-containing protein | DWX04_17260 | Not Available | Positive | 4018183 - 4018809 | 24876.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DWX04_17265 | Not Available | Positive | 4018828 - 4020132 | 47643.1 |
| 16s rrna processing protein rimm | DWX04_17270 | Not Available | Positive | 4020144 - 4020662 | 19831.7 |
| m23 family peptidase | DWX04_17275 | Not Available | Positive | 4020681 - 4021538 | 32093.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWX04_17280 | Not Available | Positive | 4021546 - 4022694 | 42410.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

