Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_17185 | Not Available | Positive | 4006851 - 4008209 | 52443.6 |
| hypothetical protein | DWX04_17190 | Not Available | Positive | 4008255 - 4008728 | 17408.3 |
| type vi secretion system contractile sheath protein tssc | DWX04_17195 | Not Available | Positive | 4008734 - 4010101 | 51660.8 |
| translation initiation factor | DWX04_17200 | Not Available | Negative | 4010277 - 4010615 | 12663.2 |
| redox-sensing transcriptional repressor rex | DWX04_17205 | Not Available | Positive | 4010733 - 4011383 | 24251.6 |
| faa hydrolase family protein | DWX04_17210 | Not Available | Positive | 4011388 - 4012005 | 23340.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DWX04_17215 | Not Available | Positive | 4012002 - 4012484 | 17376.1 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | DWX04_17220 | Not Available | Negative | 4012535 - 4013425 | 32678.7 |
| metallophosphoesterase | DWX04_17225 | Not Available | Positive | 4013499 - 4014338 | 31338.6 |
| duf3836 domain-containing protein | DWX04_17230 | Not Available | Positive | 4014566 - 4015036 | 18198.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

