Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_17085 | Not Available | Negative | 3987521 - 3988588 | 40971.2 |
| hypothetical protein | DWX04_17090 | Not Available | Negative | 3988613 - 3991105 | 95314.5 |
| pkd domain-containing protein | DWX04_17095 | Not Available | Negative | 3991109 - 3992017 | 34887.7 |
| hypothetical protein | DWX04_17100 | Not Available | Negative | 3992019 - 3992531 | 20654.8 |
| type vi secretion system transmembrane protein tssq | DWX04_17105 | Not Available | Negative | 3992543 - 3993046 | 19377.8 |
| hypothetical protein | DWX04_17110 | Not Available | Negative | 3993066 - 3994028 | 36916.2 |
| hypothetical protein | DWX04_17115 | Not Available | Negative | 3994049 - 3995209 | 44442.7 |
| hypothetical protein | DWX04_17120 | Not Available | Negative | 3995221 - 3996099 | 33860.5 |
| flagellar protein flgn | DWX04_17125 | Not Available | Negative | 3996111 - 3997955 | 70162.1 |
| hypothetical protein | DWX04_17130 | Not Available | Negative | 3997963 - 3998427 | 17718.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

