Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter | DWX04_01330 | Not Available | Positive | 303332 - 305584 | 83885.5 |
| aminoglycoside phosphotransferase | DWX04_01335 | Not Available | Positive | 305692 - 306774 | 41591.0 |
| s9 family peptidase | DWX04_01340 | Not Available | Negative | 306860 - 309301 | 94322.1 |
| hypothetical protein | DWX04_01345 | Not Available | Negative | 309411 - 310145 | 27039.4 |
| hybrid sensor histidine kinase/response regulator | DWX04_01350 | Not Available | Negative | 310341 - 314741 | 169199.0 |
| pectin esterase | DWX04_01355 | Not Available | Negative | 314936 - 316663 | 64142.7 |
| hypothetical protein | DWX04_01360 | Not Available | Negative | 316670 - 317830 | 43384.3 |
| pectate lyase | DWX04_01365 | Not Available | Negative | 317851 - 319464 | 61318.2 |
| cupin domain-containing protein | DWX04_01370 | Not Available | Positive | 319653 - 320144 | 18139.9 |
| porin family protein | DWX04_01375 | Not Available | Negative | 320302 - 321000 | 25700.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

