Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3876 domain-containing protein | DWX04_16980 | Not Available | Negative | 3969365 - 3969733 | 13803.7 |
| trag family conjugative transposon atpase | DWX04_16985 | Not Available | Negative | 3969730 - 3972255 | 97203.9 |
| duf4133 domain-containing protein | DWX04_16990 | Not Available | Negative | 3972252 - 3972581 | 12720.0 |
| duf4134 domain-containing protein | DWX04_16995 | Not Available | Negative | 3972587 - 3972883 | 10417.8 |
| hypothetical protein | DWX04_17005 | Not Available | Positive | 3973443 - 3974453 | 38607.2 |
| hypothetical protein | DWX04_17010 | Not Available | Positive | 3974486 - 3975625 | 44533.9 |
| duf4122 domain-containing protein | DWX04_17015 | Not Available | Negative | 3976080 - 3976745 | 25202.0 |
| duf3408 domain-containing protein | DWX04_17020 | Not Available | Negative | 3976733 - 3977182 | 17087.3 |
| para family protein | DWX04_17025 | Not Available | Negative | 3977191 - 3977985 | 30158.7 |
| hypothetical protein | DWX04_17030 | Not Available | Negative | 3977963 - 3978142 | 7124.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

