Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_16865 | Not Available | Positive | 3950735 - 3951889 | 42462.2 |
| hypothetical protein | DWX04_16870 | Not Available | Positive | 3952009 - 3952863 | 33473.7 |
| hypothetical protein | DWX04_16875 | Not Available | Negative | 3953015 - 3953206 | 7381.37 |
| hypothetical protein | DWX04_16880 | Not Available | Negative | 3953281 - 3953481 | 7883.98 |
| lysm domain-containing protein | DWX04_16885 | Not Available | Negative | 3953484 - 3954467 | 37526.6 |
| hypothetical protein | DWX04_16890 | Not Available | Negative | 3954704 - 3955330 | 24537.8 |
| alpha/beta hydrolase | DWX04_16895 | Not Available | Negative | 3955336 - 3956007 | 25019.2 |
| hypothetical protein | DWX04_16900 | Not Available | Negative | 3956013 - 3956741 | 28157.5 |
| hypothetical protein | DWX04_16910 | Not Available | Positive | 3957380 - 3958636 | 49032.6 |
| hypothetical protein | DWX04_16915 | Not Available | Positive | 3958617 - 3959606 | 38351.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

