Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_16810 | Not Available | Positive | 3943235 - 3944128 | 35040.8 |
| hypothetical protein | DWX04_16815 | Not Available | Positive | 3944135 - 3944569 | 16065.8 |
| hypothetical protein | DWX04_16820 | Not Available | Positive | 3944566 - 3945546 | 37987.3 |
| hypothetical protein | DWX04_16825 | Not Available | Positive | 3945589 - 3946068 | 18183.8 |
| duf4120 domain-containing protein | DWX04_16830 | Not Available | Positive | 3946163 - 3946453 | 11062.0 |
| hypothetical protein | DWX04_16840 | Not Available | Positive | 3946735 - 3947013 | 11263.2 |
| duf4121 family protein | DWX04_16845 | Not Available | Positive | 3947000 - 3947806 | 31537.6 |
| sam-dependent dna methyltransferase | DWX04_16850 | Not Available | Positive | 3947808 - 3948566 | 29020.2 |
| hypothetical protein | DWX04_16855 | Not Available | Positive | 3948579 - 3949814 | 46882.9 |
| hypothetical protein | DWX04_16860 | Not Available | Positive | 3949827 - 3950708 | 33208.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

