Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | DWX04_16760 | Not Available | Positive | 3934901 - 3936682 | 65880.9 |
| tetraacyldisaccharide 4'-kinase | DWX04_16765 | Not Available | Positive | 3936690 - 3937790 | 42254.6 |
| purine-nucleoside phosphorylase | DWX04_16770 | Not Available | Positive | 3937753 - 3938562 | 29954.3 |
| thiamine-phosphate kinase | DWX04_16775 | Not Available | Positive | 3938567 - 3939607 | 38227.8 |
| Trna-phe | Not Available | Not Available | Positive | 3939725 - 3939800 | Not Available |
| hypothetical protein | DWX04_16785 | Not Available | Negative | 3939891 - 3940220 | 13167.2 |
| site-specific integrase | DWX04_16790 | Not Available | Positive | 3940274 - 3941509 | 47192.2 |
| hypothetical protein | DWX04_16795 | Not Available | Negative | 3941590 - 3941784 | 7464.14 |
| hypothetical protein | DWX04_16800 | Not Available | Positive | 3941808 - 3942083 | 10561.3 |
| hypothetical protein | DWX04_16805 | Not Available | Positive | 3942104 - 3943231 | 44086.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

