Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 95 protein | DWX04_16600 | Not Available | Positive | 3875628 - 3878030 | 88942.6 |
| mfs transporter | DWX04_16605 | Not Available | Positive | 3878216 - 3879610 | 50705.3 |
| duf5107 domain-containing protein | DWX04_16610 | Not Available | Positive | 3879623 - 3882964 | 128296.0 |
| glycoside hydrolase family 97 protein | DWX04_16615 | Not Available | Positive | 3882961 - 3884946 | 75307.1 |
| hybrid sensor histidine kinase/response regulator | DWX04_16620 | Not Available | Positive | 3885030 - 3889067 | 154543.0 |
| alpha-galactosidase | DWX04_16625 | Not Available | Positive | 3889271 - 3891298 | 76325.4 |
| tonb-dependent receptor | DWX04_16630 | Not Available | Positive | 3891338 - 3894391 | 113310.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_16635 | Not Available | Positive | 3894437 - 3896056 | 61972.6 |
| galactose mutarotase | DWX04_16640 | Not Available | Positive | 3896146 - 3897168 | 38668.4 |
| beta-mannosidase | DWX04_16645 | Not Available | Positive | 3897198 - 3900140 | 111435.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

