Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DWX04_16540 | Not Available | Negative | 3860034 - 3861311 | 46994.8 |
| acyl-coa thioesterase | DWX04_16545 | Not Available | Positive | 3861434 - 3861877 | 16848.2 |
| duf1573 domain-containing protein | DWX04_16550 | Not Available | Negative | 3861942 - 3862670 | 27203.6 |
| duf4221 domain-containing protein | DWX04_16555 | Not Available | Negative | 3862667 - 3863821 | 45175.7 |
| hypothetical protein | DWX04_16560 | Not Available | Negative | 3863937 - 3864203 | 9793.29 |
| creatininase family protein | DWX04_16565 | Not Available | Negative | 3864412 - 3865167 | 28446.1 |
| iron-containing alcohol dehydrogenase | DWX04_16570 | Not Available | Negative | 3865167 - 3866339 | 42878.9 |
| atp-binding protein | DWX04_16575 | Not Available | Positive | 3866563 - 3867834 | 49393.9 |
| duf418 domain-containing protein | DWX04_16585 | Not Available | Positive | 3868159 - 3869340 | 45373.0 |
| glycoside hydrolase family 92 protein | DWX04_16595 | Not Available | Positive | 3873237 - 3875453 | 83866.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

