Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | DWX04_01280 | Not Available | Positive | 291472 - 292425 | 36211.4 |
| dna polymerase iii subunit delta | DWX04_01285 | Not Available | Positive | 292453 - 293577 | 43533.9 |
| hypothetical protein | DWX04_01290 | Not Available | Positive | 293667 - 295181 | 57771.0 |
| gliding motility lipoprotein gldh | DWX04_01295 | Not Available | Positive | 295144 - 295641 | 18762.5 |
| rod shape-determining protein roda | DWX04_01300 | Not Available | Negative | 295645 - 297099 | 54268.6 |
| penicillin-binding protein 2 | DWX04_01305 | Not Available | Negative | 297080 - 298930 | 69195.5 |
| rod shape-determining protein mred | DWX04_01310 | Not Available | Negative | 298930 - 299430 | 18956.0 |
| rod shape-determining protein mrec | DWX04_01315 | Not Available | Negative | 299439 - 300287 | 31395.4 |
| rod shape-determining protein | DWX04_01320 | Not Available | Negative | 300393 - 301415 | 36937.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DWX04_01325 | Not Available | Negative | 301528 - 303051 | 56236.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

