Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subunit c | DWX04_16330 | Not Available | Negative | 3815630 - 3815884 | 8181.62 |
| atp synthase f0 subunit a | DWX04_16335 | Not Available | Negative | 3815916 - 3817007 | 40549.1 |
| hypothetical protein | DWX04_16340 | Not Available | Negative | 3817009 - 3817422 | 16367.0 |
| hypothetical protein | DWX04_16345 | Not Available | Negative | 3817432 - 3817686 | 9226.99 |
| atp synthase subunit beta | DWX04_16350 | Not Available | Negative | 3817695 - 3819230 | 56123.4 |
| peptidase m28 | DWX04_16355 | Not Available | Negative | 3819426 - 3820973 | 57370.0 |
| ppx/gppa family phosphatase | DWX04_16360 | Not Available | Negative | 3821116 - 3822030 | 34342.0 |
| glycosyltransferase | DWX04_16370 | Not Available | Negative | 3824233 - 3825360 | 43457.4 |
| udp-2,3-diacylglucosamine diphosphatase | DWX04_16375 | Not Available | Negative | 3825357 - 3826160 | 31151.0 |
| hypothetical protein | DWX04_16380 | Not Available | Negative | 3826337 - 3826774 | 16838.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

