Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | DWX04_16180 | Not Available | Negative | 3777206 - 3778294 | 40789.6 |
| phosphohydrolase | DWX04_16185 | Not Available | Positive | 3778360 - 3779061 | 27543.0 |
| hypothetical protein | DWX04_16190 | Not Available | Positive | 3779058 - 3779606 | 20508.7 |
| copper-translocating p-type atpase | DWX04_16195 | Not Available | Negative | 3779694 - 3781907 | 79986.0 |
| duf3298 domain-containing protein | DWX04_16200 | Not Available | Positive | 3782086 - 3782934 | 32059.0 |
| ribosomal rna small subunit methyltransferase g | DWX04_16205 | Not Available | Positive | 3782955 - 3783584 | 23821.2 |
| mbl fold metallo-hydrolase | DWX04_16210 | Not Available | Positive | 3783603 - 3784241 | 23832.3 |
| glycine dehydrogenase (aminomethyl-transferring) | DWX04_16215 | Not Available | Positive | 3784277 - 3787126 | 105224.0 |
| s9 family peptidase | DWX04_16220 | Not Available | Negative | 3787407 - 3790121 | 102623.0 |
| hypothetical protein | DWX04_16225 | Not Available | Negative | 3790154 - 3790390 | 8867.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

