Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DWX04_16080 | Not Available | Positive | 3754838 - 3755860 | 37658.9 |
| acrb/acrd/acrf family protein | DWX04_16085 | Not Available | Positive | 3755942 - 3759112 | 115826.0 |
| hypothetical protein | DWX04_16090 | Not Available | Positive | 3759185 - 3759478 | 11224.5 |
| hypothetical protein | DWX04_16095 | Not Available | Positive | 3759615 - 3760982 | 50814.9 |
| hypothetical protein | DWX04_16100 | Not Available | Positive | 3760969 - 3761931 | 35950.6 |
| mboat family protein | DWX04_16105 | Not Available | Positive | 3761909 - 3763390 | 57220.6 |
| acyltransferase | DWX04_16110 | Not Available | Negative | 3763447 - 3764184 | 27156.9 |
| hypothetical protein | DWX04_16115 | Not Available | Negative | 3764218 - 3764514 | 11622.0 |
| hypothetical protein | DWX04_16120 | Not Available | Negative | 3764602 - 3765021 | 15355.0 |
| peptidase m15 | DWX04_16125 | Not Available | Positive | 3765454 - 3765780 | 12387.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

