Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_16030 | Not Available | Negative | 3740256 - 3741404 | 42381.6 |
| nadp-specific glutamate dehydrogenase | DWX04_16035 | Not Available | Negative | 3741560 - 3742894 | 48958.7 |
| hypothetical protein | DWX04_16040 | Not Available | Negative | 3743050 - 3743232 | 6713.74 |
| nadp-dependent malic enzyme | DWX04_16045 | Not Available | Negative | 3743361 - 3745646 | 84255.2 |
| efflux rnd transporter periplasmic adaptor subunit | DWX04_16050 | Not Available | Positive | 3746098 - 3747309 | 43707.5 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWX04_16055 | Not Available | Positive | 3747363 - 3750581 | 116875.0 |
| tolc family protein | DWX04_16060 | Not Available | Positive | 3750593 - 3751978 | 50365.3 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DWX04_16065 | Not Available | Positive | 3752002 - 3752769 | 27537.9 |
| tetr/acrr family transcriptional regulator | DWX04_16070 | Not Available | Positive | 3752799 - 3753452 | 25470.9 |
| tolc family protein | DWX04_16075 | Not Available | Positive | 3753489 - 3754814 | 49635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

