Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_15980 | Not Available | Negative | 3726533 - 3727405 | 33451.4 |
| malate dehydrogenase | DWX04_15985 | Not Available | Positive | 3727562 - 3728503 | 32849.0 |
| hypothetical protein | DWX04_15990 | Not Available | Negative | 3728601 - 3730385 | 65157.6 |
| chromosome partitioning protein parb | DWX04_15995 | Not Available | Negative | 3730413 - 3730925 | 19744.9 |
| duf3440 domain-containing protein | DWX04_16000 | Not Available | Negative | 3730922 - 3732223 | 52313.9 |
| hypothetical protein | DWX04_16005 | Not Available | Negative | 3732213 - 3732608 | 15230.1 |
| nadp-specific glutamate dehydrogenase | DWX04_16010 | Not Available | Negative | 3732770 - 3734107 | 48494.3 |
| phosphoenolpyruvate synthase | DWX04_16015 | Not Available | Positive | 3734342 - 3737299 | 112927.0 |
| duf4925 domain-containing protein | DWX04_16020 | Not Available | Positive | 3737409 - 3738614 | 43424.5 |
| port family protein | DWX04_16025 | Not Available | Negative | 3739471 - 3740247 | 29116.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

