Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | DWX04_15925 | Not Available | Positive | 3714787 - 3715806 | 37876.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DWX04_15935 | Not Available | Positive | 3716569 - 3717327 | 29773.6 |
| mrp family atp-binding protein | DWX04_15940 | Not Available | Positive | 3717338 - 3718438 | 39645.1 |
| tonb family protein | DWX04_15945 | Not Available | Negative | 3718506 - 3720356 | 69524.6 |
| blai/meci/copy family transcriptional regulator | DWX04_15950 | Not Available | Negative | 3720379 - 3720744 | 14087.0 |
| copper resistance protein nlpe | DWX04_15955 | Not Available | Negative | 3720930 - 3721358 | 15888.7 |
| abc transporter permease | DWX04_15960 | Not Available | Negative | 3721394 - 3722644 | 47484.7 |
| abc transporter permease | DWX04_15965 | Not Available | Negative | 3722659 - 3723834 | 44227.0 |
| biotin/lipoyl-binding protein | DWX04_15970 | Not Available | Negative | 3723841 - 3724827 | 35975.9 |
| tolc family protein | DWX04_15975 | Not Available | Negative | 3724854 - 3726317 | 53453.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

