Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWX04_15665 | Not Available | Negative | 3654440 - 3655387 | 36866.2 |
| duf4422 domain-containing protein | DWX04_15670 | Not Available | Negative | 3655391 - 3656215 | 32690.3 |
| acyltransferase | DWX04_15675 | Not Available | Negative | 3656200 - 3656811 | 22980.1 |
| glycosyltransferase family 2 protein | DWX04_15680 | Not Available | Negative | 3656816 - 3657976 | 44269.4 |
| glycosyltransferase | DWX04_15685 | Not Available | Negative | 3657984 - 3659108 | 43064.3 |
| glycosyltransferase family 2 protein | DWX04_15690 | Not Available | Negative | 3659105 - 3660010 | 34484.7 |
| o-antigen ligase domain-containing protein | DWX04_15695 | Not Available | Negative | 3659991 - 3661451 | 54830.9 |
| hypothetical protein | DWX04_15700 | Not Available | Negative | 3661455 - 3663602 | 82532.6 |
| hypothetical protein | DWX04_15705 | Not Available | Negative | 3663608 - 3664471 | 32630.1 |
| sugar transferase | DWX04_15710 | Not Available | Negative | 3664508 - 3665683 | 44978.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

