Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DWX04_15565 | Not Available | Positive | 3632471 - 3633409 | 35503.6 |
| hybrid sensor histidine kinase/response regulator | DWX04_15570 | Not Available | Positive | 3633419 - 3634558 | 42228.6 |
| endonuclease | DWX04_15575 | Not Available | Negative | 3634563 - 3635624 | 40748.7 |
| hybrid sensor histidine kinase/response regulator | DWX04_15580 | Not Available | Negative | 3635628 - 3637478 | 71127.3 |
| response regulator | DWX04_15585 | Not Available | Positive | 3637622 - 3637978 | 13485.5 |
| glycosyltransferase family 2 protein | DWX04_15590 | Not Available | Negative | 3637982 - 3639187 | 46044.0 |
| glycosyltransferase family 1 protein | DWX04_15595 | Not Available | Negative | 3639184 - 3640302 | 42687.0 |
| glycosyltransferase family 2 protein | DWX04_15600 | Not Available | Negative | 3640309 - 3641151 | 32126.5 |
| sam-dependent methyltransferase | DWX04_15605 | Not Available | Negative | 3641135 - 3641917 | 31203.3 |
| glycosyltransferase family 4 protein | DWX04_15610 | Not Available | Negative | 3641914 - 3643113 | 46006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

