Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DWX04_15515 | Not Available | Positive | 3621124 - 3623469 | 89659.5 |
| hsp20/alpha crystallin family protein | DWX04_15520 | Not Available | Negative | 3623710 - 3624153 | 16943.0 |
| hypothetical protein | DWX04_15525 | Not Available | Negative | 3624418 - 3624876 | 17636.3 |
| linear amide c-n hydrolase | DWX04_15530 | Not Available | Negative | 3625111 - 3626169 | 39402.4 |
| hypothetical protein | DWX04_15535 | Not Available | Negative | 3626328 - 3626567 | 9399.8 |
| hpaii family restriction endonuclease | DWX04_15540 | Not Available | Positive | 3626670 - 3627758 | 41401.0 |
| alpha-amylase | DWX04_15545 | Not Available | Negative | 3627887 - 3629584 | 64713.6 |
| phospholipase | DWX04_15550 | Not Available | Negative | 3629601 - 3630386 | 29317.4 |
| [acyl-carrier-protein] s-malonyltransferase | DWX04_15555 | Not Available | Negative | 3630512 - 3631399 | 31271.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DWX04_15560 | Not Available | Negative | 3631526 - 3632350 | 29154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

