Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_01175 | Not Available | Positive | 262232 - 262507 | 10841.2 |
| hypothetical protein | DWX04_01180 | Not Available | Negative | 262504 - 262734 | 8980.94 |
| hypothetical protein | DWX04_01185 | Not Available | Negative | 262814 - 263602 | 28499.5 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_01190 | Not Available | Negative | 263627 - 265168 | 57184.2 |
| tonb-dependent receptor | DWX04_01195 | Not Available | Negative | 265193 - 268153 | 109761.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_01200 | Not Available | Negative | 268382 - 269878 | 56804.6 |
| tonb-dependent receptor | DWX04_01205 | Not Available | Negative | 269891 - 273019 | 115149.0 |
| tonb-dependent receptor | DWX04_01215 | Not Available | Positive | 275141 - 278071 | 107492.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_01220 | Not Available | Positive | 278090 - 279568 | 55303.6 |
| tonb-dependent receptor | DWX04_01225 | Not Available | Positive | 279837 - 282629 | 103956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

