Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DWX04_15415 | Not Available | Positive | 3592921 - 3593352 | 15152.5 |
| sodium ion-translocating decarboxylase subunit beta | DWX04_15420 | Not Available | Positive | 3593354 - 3594514 | 40880.4 |
| alpha-amlyase | DWX04_15425 | Not Available | Positive | 3594689 - 3594937 | 9267.24 |
| Trna-thr | Not Available | Not Available | Positive | 3595463 - 3595538 | Not Available |
| carboxypeptidase regulatory-like domain-containing protein | DWX04_15435 | Not Available | Negative | 3595563 - 3596387 | 31812.3 |
| hypothetical protein | DWX04_15440 | Not Available | Negative | 3596676 - 3596918 | 9724.73 |
| hypothetical protein | DWX04_15445 | Not Available | Negative | 3596854 - 3597087 | 8614.47 |
| asparagine synthase b | DWX04_15450 | Not Available | Negative | 3597166 - 3598836 | 62806.7 |
| glutamate synthase subunit beta | DWX04_15455 | Not Available | Negative | 3598853 - 3600193 | 48716.6 |
| glutamate synthase large subunit | DWX04_15460 | Not Available | Negative | 3600234 - 3604712 | 164903.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

