Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | DWX04_15365 | Not Available | Negative | 3584778 - 3585785 | 37605.3 |
| septum formation protein maf | DWX04_15370 | Not Available | Negative | 3585852 - 3586433 | 21744.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DWX04_15375 | Not Available | Negative | 3586451 - 3586969 | 19125.2 |
| duf2520 domain-containing protein | DWX04_15380 | Not Available | Negative | 3586975 - 3587781 | 29767.2 |
| hypothetical protein | DWX04_15385 | Not Available | Negative | 3587781 - 3588107 | 11854.2 |
| nad(p)h nitroreductase | DWX04_15390 | Not Available | Negative | 3588110 - 3588646 | 20065.4 |
| gnat family n-acetyltransferase | DWX04_15395 | Not Available | Positive | 3588692 - 3589714 | 40006.0 |
| methylmalonyl-coa epimerase | DWX04_15400 | Not Available | Positive | 3589871 - 3590284 | 14910.1 |
| acyl-coa carboxylase subunit beta | DWX04_15405 | Not Available | Positive | 3590387 - 3591940 | 56473.9 |
| lamin tail domain-containing protein | DWX04_15410 | Not Available | Positive | 3591968 - 3592897 | 34102.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

