Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_15310 | Not Available | Positive | 3573673 - 3575589 | 73975.2 |
| hypothetical protein | DWX04_15315 | Not Available | Negative | 3575847 - 3577217 | 51808.2 |
| hypothetical protein | DWX04_15320 | Not Available | Negative | 3577501 - 3578889 | 53794.4 |
| nucleotidyltransferase | DWX04_15325 | Not Available | Positive | 3579179 - 3579478 | 11620.9 |
| hypothetical protein | DWX04_15335 | Not Available | Positive | 3580463 - 3580750 | 11094.8 |
| hypothetical protein | DWX04_15340 | Not Available | Positive | 3580850 - 3581212 | 13984.1 |
| tlpa family protein disulfide reductase | DWX04_15345 | Not Available | Negative | 3581346 - 3581867 | 19785.8 |
| mfs transporter | DWX04_15350 | Not Available | Positive | 3581927 - 3583102 | 42732.7 |
| duf2721 domain-containing protein | DWX04_15355 | Not Available | Negative | 3583104 - 3583493 | 14601.4 |
| duf3843 family protein | DWX04_15360 | Not Available | Positive | 3583612 - 3584781 | 45912.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

