Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_15105 | Not Available | Positive | 3538674 - 3538952 | 10742.0 |
| hypothetical protein | DWX04_15110 | Not Available | Positive | 3538954 - 3539364 | 15602.8 |
| hypothetical protein | DWX04_15115 | Not Available | Positive | 3539371 - 3539985 | 24256.8 |
| penicillin-binding protein | DWX04_15120 | Not Available | Positive | 3540010 - 3541083 | 39351.0 |
| hypothetical protein | DWX04_15125 | Not Available | Positive | 3541080 - 3541535 | 17121.0 |
| hypothetical protein | DWX04_15130 | Not Available | Positive | 3541730 - 3542320 | 22569.1 |
| site-specific integrase | DWX04_15140 | Not Available | Positive | 3543032 - 3544249 | 46743.0 |
| duf3871 family protein | DWX04_15145 | Not Available | Positive | 3545060 - 3546082 | 38307.5 |
| duf1071 domain-containing protein | DWX04_15150 | Not Available | Positive | 3546205 - 3546951 | 28275.8 |
| hypothetical protein | DWX04_15155 | Not Available | Positive | 3546948 - 3547886 | 36019.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

