Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_15055 | Not Available | Positive | 3530591 - 3530908 | 12402.9 |
| hypothetical protein | DWX04_15060 | Not Available | Positive | 3531452 - 3531658 | 8278.25 |
| winged helix-turn-helix transcriptional regulator | DWX04_15065 | Not Available | Positive | 3531621 - 3532262 | 24904.1 |
| zinc ribbon domain-containing protein | DWX04_15070 | Not Available | Positive | 3532468 - 3534762 | 90095.9 |
| duf3871 family protein | DWX04_15075 | Not Available | Positive | 3535088 - 3536080 | 37395.7 |
| hypothetical protein | DWX04_15080 | Not Available | Positive | 3536168 - 3536440 | 10430.3 |
| hypothetical protein | DWX04_15085 | Not Available | Positive | 3536525 - 3536800 | 10934.9 |
| dna repair protein | DWX04_15090 | Not Available | Positive | 3536812 - 3537258 | 16668.1 |
| site-specific integrase | DWX04_15095 | Not Available | Positive | 3537409 - 3537996 | 22641.9 |
| hypothetical protein | DWX04_15100 | Not Available | Positive | 3538097 - 3538288 | 7472.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

