Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_15000 | Not Available | Positive | 3520262 - 3520477 | 8509.12 |
| hypothetical protein | DWX04_15005 | Not Available | Negative | 3520591 - 3521346 | 27663.9 |
| hypothetical protein | DWX04_15010 | Not Available | Positive | 3521694 - 3522308 | 23057.4 |
| sodium:glutamate symporter | DWX04_15015 | Not Available | Positive | 3522523 - 3523902 | 49775.1 |
| duf4375 domain-containing protein | DWX04_15020 | Not Available | Negative | 3524072 - 3524581 | 19574.0 |
| hypothetical protein | DWX04_15025 | Not Available | Positive | 3524818 - 3525519 | 25285.6 |
| gggtgrt protein | DWX04_15030 | Not Available | Positive | 3525538 - 3526548 | 35757.9 |
| site-specific integrase | DWX04_15035 | Not Available | Positive | 3526893 - 3528110 | 46696.1 |
| hypothetical protein | DWX04_15040 | Not Available | Positive | 3528192 - 3529034 | 32333.8 |
| hypothetical protein | DWX04_15050 | Not Available | Positive | 3529318 - 3530526 | 45348.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

