Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | DWX04_14950 | Not Available | Negative | 3508726 - 3511479 | 100792.0 |
| ssra-binding protein | DWX04_14955 | Not Available | Negative | 3511517 - 3511969 | 17572.4 |
| duf1282 domain-containing protein | DWX04_14960 | Not Available | Negative | 3511969 - 3512538 | 21095.3 |
| recombinase | DWX04_14965 | Not Available | Positive | 3512913 - 3514001 | 41882.2 |
| hypothetical protein | DWX04_14970 | Not Available | Positive | 3514394 - 3514732 | 13092.3 |
| duf5119 domain-containing protein | DWX04_14975 | Not Available | Positive | 3514729 - 3515736 | 37843.5 |
| fimbrillin family protein | DWX04_14980 | Not Available | Positive | 3515780 - 3516919 | 42215.0 |
| fimbrillin family protein | DWX04_14985 | Not Available | Positive | 3517050 - 3518120 | 39476.8 |
| hypothetical protein | DWX04_14990 | Not Available | Positive | 3518186 - 3519892 | 63831.8 |
| hypothetical protein | DWX04_14995 | Not Available | Positive | 3520195 - 3520317 | 4290.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

